SSalign A DNA/RNA alignment program.
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SSalign Tags

RNA Batch RNA DNA sequence text alignment column alignment DNA loci DNA read alignment formats write alignment formats alignment create alignment document alignment assembly RNA sequence RNA world simulator dynamic RNA world RNA world DNA to RNA RNA to Aminoacid RNA polymerase alignment visualizeation DNA manipulation manipulate alignment alignment manipulation sequence alignment creator edit RNA sequence manage DNA microsatellite DNA DNA alignment DNA profile alignment RNA structure RNA structure visualization global sequence alignment decode RNA structure analyze RNA-Seq data RNA secondary structure Sequence alignment sequence alignment algorithm alignment accuracy Protein Alignment bayesian alignment RNA 3D alignments multiple alignment alignment editor Alignment Method analyze RNA sequence RNA molecule family draw secondary RNA structure RNA structure generator rank structure alignment Smith-Waterman alignment RNA sequence display alignment spliced alignment DNA sequence alignment pairwise alignment analysis analyze pairwise alignment view alignment file display alignment file analyze DNA alignment find alignment gap locate alignment gap protein sequences alignment 3D-structure alignment RNA secondary structures alignment analysis RNA analysis NCBI BLAST alignment DNA Interaction RNA Alignment RNA Ontology Consortium RNA backbone nomenclature digital DNA page alignment spoken english audio n70 mp3 converter koran jawa post opera 8.65.sis dss dj 5 directdraw.com msvcr9.0 dll puk key generator garden arbor design naruto games for free play virtual download print artist

SSalign Description

SSalign was developed due to a need to look at all possible stem-loop structures that a large number of DNA/RNA sequences could form. Aligning each sequence with its reverse using available programs proved not fast enough and quite problematic as extensive post-processing of the results was required to remove redundant and find (and clean) "impossible" alignments. Get SSalign and take it for a spin to see what it can actually do for you!

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