Suitename RNA analysis made easy.
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Suitename Tags

analysis Analyze RNA Batch RNA assembly RNA sequence RNA world simulator dynamic RNA world RNA world DNA to RNA RNA to Aminoacid RNA polymerase edit RNA sequence RNA structure RNA secondary structure viewer RNA structure visualization RNA-seq data analysis decode RNA structure analyze RNA-Seq data RNA secondary structure RNA 3D alignments analyze RNA sequence RNA sequence analysis RNA molecule family draw secondary RNA structure RNA structure generator RNA sequence RNA secondary structures RNA analysis RNA Alignment RNA Ontology Consortium RNA backbone nomenclature

Suitename Description

Suitename is a handy, small, command prompt application designed to support the ROC RNA Ontology Consortium consensus RNA backbone nomenclature and conformer-list development. From dihedral-angle input for a specific RNA structure (usually from Dangle), Suitename categorizes the RNA backbone geometry of each suite (the sugar-to-sugar version of a residue) either as an outlier ("!!") or as belonging to one of the 53 defined conformer bins. The output is either a one-line-per-suite report, or a linear conformer string (as shown below the image here) in one of several variant formats.

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